URL Form
http://www.rna-society.org/cncrnadb/php/api.php?RNAtype=**[&keyword=**][&organism=**][&fuzzy=**]
- RNAtype = The type of RNA (mRNA/ncRNA) that the user wants to search
- keyword = Gene symbol/gene id/ensemble id that the user wants to search
- organism = Organism that the user wants to search
Specification of Tag Values
- For " RNAtype " tag (necessary):
| Valid Values | Note |
|---|---|
| mRNA | Untranslated mRNA |
| ncRNA | Translated ncRNA |
- For " organism " tag (optional):
| Valid Values | Note |
|---|---|
| Homo sapiens | organism limit to 'Homo sapiens' |
| Mus musculus | organism limit to 'Mus musculus' |
Note
- cncrnadb supports fuzzy queries, users are able to obtain more results by streamlining input. For example, you can get all the information of keyword contained 'FN1' in mRNA by the following way: http://www.rna-society.org/cncrnadb/php/api.php?RNAtype=mRNA&keyword=FN1&fuzzy=true
Example
- Searching for details of mRNA:
- http://www.rna-society.org/cncrnadb/php/api.php?RNAtype=mRNA
- Searching for details which include FN1 as keyword in mRNA:
- http://www.rna-society.org/cncrnadb/php/api.php?RNAtype=mRNA&keyword=FN1&fuzzy=true&fuzzy=false
- Searching for mRNA in Homo sapiens which include FN1 as keyword:
- http://www.rna-society.org/cncrnadb/php/api.php?RNAtype=mRNA&keyword=FN1&organism='Homo sapiens'&fuzzy=false