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Detail Information


Basic information:


Untranslated mRNA: Sponge mRNA

Related IDs cncRNA ID CNC_M_001847
Name STAT3
Gene ID 6774
Location Coordinate(Strand) 17:42313324-42388568(-)
Locus Sequence
Organism Homo sapiens

Evidence support:

  
In vivo/vitro assay In vitro assay
Low-throughput method Transfection assay;Western blotting;qRT-PCR;Luciferase assay;siRNA;Proliferation assay
High-throughput method /
Tissue/Cell SNB19 cell;SF188 cell
Description of experimental evidence The mRNA was detected by transfection assay, western blotting, qRT-PCR, luciferase assay, siRNA and proliferation assay in SNB19 cell and SF188 cell, which can act as a decoy for Pten-targeting microRNAs.

Orthologues:

  
Chimpanzee ENSPTRG00000009200  
Mouse ENSMUSG00000004040  
Drosophila /
Zebrafish ENSDARG00000022712  

References:

  
PMID 22000015
Description These include 7,000 genes whose transcripts act as miR sponges and 148 genes that act through alternative, nonsponge interactions. Biochemical analyses in cell lines confirmed that this network regulates established drivers of tumor initiation and subtype implementation, including PTEN, PDGFRA, RB1, VEGFA, STAT3, and RUNX1, suggesting that these interactions mediate crosstalk between canonical oncogenic pathways. See Figure 5A for details.

Related Subcelluar Localization:

  
Subcelluar Localization RLID Link to RNALocate
chromatin RLID00100373 Link to RNALocate
cytosol RLID00100374 Link to RNALocate
cytosol RLID00100375 Link to RNALocate
nucleolus RLID00100376 Link to RNALocate
nucleoplasm RLID00100377 Link to RNALocate
nucleus RLID00100378 Link to RNALocate
nucleus RLID00100379 Link to RNALocate
exosome RLID00100380 Link to RNALocate
Ribosome RLID00019850 Link to RNALocate
Cytosol RLID00019851 Link to RNALocate

Related Diseases:

  
OMIM Phenotype Phenotype MIM number Link to OMIM
Hyper-IgE recurrent infection syndrome OMIM:147060 Link to OMIM
Autoimmune disease, multisystem, infantile-onset, 1 OMIM:615952 Link to OMIM

Related Interactions:

  

  

   Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).