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Detail Information


Basic information:


Translated ncRNA: pri-miRNA

Related IDs cncRNA ID CNC_N_000807
Name sly-MIR171e
Gene ID MI0029125
Location Coordinate(Strand) 7:60893267-60893373(+)
Locus Sequence
Organism Solanum lycopersicum

Peptide information:

  
Peptide MKLGNIEGTYFIICLGRYI
Peptide length 19

Evidence support:

  
In vivo/vitro assay In vivo assay (Solanum lycopersicum)
Low-throughput method qRT-PCR
High-throughput method /
Tissue/Cell /
Description of experimental evidence The peptide was synthesized by Smartox Inc., which can enhance the accumulation of their corresponding mature miRNAs. The expression of the miRNA was detected by qRT-PCR on plant (synthetic peptide treatment).

Orthologues:

  
Human /
Chimpanzee /
Mouse /
Drosophila /
Zebrafish /

References:

  
PMID 28041928
Description LOM1 expression and mycorrhizal colonization decreased significantly in response to all the miPEPs except to that corresponding to miR171b, which activated both expression of LOM1 and mycorrhization. All the miPEPs data were collected from Figure 2.